3D models of historical collection objects

Nadja Tata

By Nadja Tata
13.02.2023 | 5 minutes reading time

What do a malachite, the nest of a weaverbird, an albino jackdaw and a Hercules beetle have in common? All of them belong to our dataset of 3D models of historical collection objects, published for the first time on the museum’s data portal under a free license in September 2022.

Screenshot of the 3D data portal trailer with 3D model of a thick-billed weaver’s nest
Screenshot of the 3D data portal trailer with 3D model of a thick-billed weaver’s nest

At the Mediasphere For Nature, we very regularly receive requests for 3D models of a wide variety of collection objects. Often, people are looking for insects but sometimes also birds and mammals, e.g. for art projects, exhibitions, animations or digital learning materials.

The kick-off for our 3D collaboration with the creative studio relative.berlin was in spring 2019 with their request for a barn owl for the animated music video MONOH – With Attitude. We don’t create 3D models of our objects as a standard procedure within our collection development and digitization process. But we were interested in the process, so we invited the team from relative.berlin to scan the barn owl themselves.

Together with our bird collection manager, Pascal Eckhoff, the Mediasphere For Nature provided the team with a female Saxon barn owl from 1845 plus a complete feather record of this species for their photogrammetry recordings on our premises. The animated owl became the secret star of the music video. In return, we received all photos, videos and the 3D model for publication.

3D digitization of the barn owl by photogrammetry with the team of relative.berlin and our collection manager Pascal, photos from left to right: relative.berlin, Timur Coban & Nadja Tata / MfN
3D digitization of the barn owl by photogrammetry with the team of relative.berlin and our collection manager Pascal, photos from left to right: relative.berlin, Timur Coban & Nadja Tata / MfN

In recent years, the museum has become increasingly involved with the 3D media format in the course of collection discovery and technology development. With a DISC3D scanner for insects, two CT scanners, surface hand scanners and other photogrammetric systems, we have the ability to produce 3D images for various purposes. However, 3D digitization as a service is still in development. A particular challenge here are high-quality models of objects with extremely hairy, shiny or feathery surfaces - and the Museum has plenty of those…

Historical hairy and feathery friends, not all of which, in retrospect, were perfect for a 3D scan using photogrammetry, photos: Nadja Tata / MfN
Historical hairy and feathery friends, not all of which, in retrospect, were perfect for a 3D scan using photogrammetry, photos: Nadja Tata / MfN

Together with our cooperation partner relative.berlin, we came up with the idea of using the barn owl as a starting point for a photogrammetry-based journey in 3D through our collection. All 3D models were to be made available to the public under a free license (CC-BY) via our data portal. In addition to various birds, objects such as minerals, insects, mammals, reptiles, and archival items from the museum’s Historical Archive were shortlisted. Together with the digitization managers and collection staff of the various sub-collections, we set out to find objects that met very clear criteria:

- historical significance

- as complete as possible metadata on location, collector & year

- size ideally between 10 and 50 cm

- no shiny metallic, transparent or completely white surfaces

- no single protruding hairs or feathers

Approx. 8 cm Peruvian spider wasp before and during its photo shoot on the turntable, photos: Nadja Tata & Christel Clerc / MfN
Approx. 8 cm Peruvian spider wasp before and during its photo shoot on the turntable, photos: Nadja Tata & Christel Clerc / MfN

Not all of the selected animals met the requirements equally well. The Peruvian spider wasp Pepsis hyperion, with the most painful sting of all time, proved to be quite “painful” even during recording and post-processing: its small size (as a wasp it is a giant, but as a digitizing object rather small), semi-transparent wings and shimmering black body presented the relative team with special challenges right on the first day of recording. The result is all the more impressive!

relative.berlin first came to the museum in September 2021 with a rig specially optimized for photogrammetry shots, complete with lighting, camera, turntable and props. Within four weeks, three more scanning days followed at our Mediasphere office, during which they scanned, among other things, a giant Triton’s trumpet from the mollusk collection, an alien-like goethite, a historical teaching model of a radiolarian from the Historical Archive, a very prickly hedgehog, a fluffy Tibetan bear cub, and even Jacob, Alexander von Humboldt’s vasa parrot. In their project description, relative.berlin explains interesting details about the photogrammetry process and subsequent modeling.

These candidates were in the spotlight, but could not convince in the end as 3D models due to too fluffy or bristly fur and feather structures. Photos: (1-4) Christel Clerc / MfN, (5-6) Marc-André Müller / relative.berlin
These candidates were in the spotlight, but could not convince in the end as 3D models due to too fluffy or bristly fur and feather structures. Photos: (1-4) Christel Clerc / MfN, (5-6) Marc-André Müller / relative.berlin

Living a culture of mistakes also means dealing openly with the failures: Jacob, for example, damaged during World War II, with only a few but very fuzzy breast feathers, proved to be just as unsuitable for 3D modeling as the hedgehog’s spines. The same was true for the protruding bristles of the hairy armadillo, which is quite low in fur for a mammal, but still too hairy. The small Asian black bear was also not convincing as a 3D model despite its cute baby face.

Screen capture of the Asian black bear head in the photogrammetry software „Reality Capture“ – as an untextured raw scan, screen capture: relative.berlin
Screen capture of the Asian black bear head in the photogrammetry software „Reality Capture“ – as an untextured raw scan, screen capture: relative.berlin

All the more successful was the educational model made of stone board of a radiolarian species, which was first discovered, described and drawn by the Potsdam zoologist Ernst Haeckel. The radiolarian’s inner skeleton (Stylodictya multispina) made of silicon dioxide can be studied particularly well in 3D using this model from 1884. Also fascinating is the view of the tufted puffin, which the poet and naturalist Adelbert von Chamisso brought back to Germany from his three-year expedition aboard the Russian warship “Rurik” between 1815 and 1818.

Historical teaching model of a radiolarian and a goethite on the turntable, photos: Christel Clerc / MfN
Historical teaching model of a radiolarian and a goethite on the turntable, photos: Christel Clerc / MfN

Mineral enthusiasts can get an all-round view of a malachite from the so-called “Old Russian State Collection”, which was given to the Royal Mineral Cabinet in Berlin, one of the predecessor institutions of today’s Museum für Naturkunde, by the Russian Tsar Alexander I in 1803, in addition to a goethite (an iron-bearing mineral). The only mammal to make it into the final selection was a juvenile seven-banded armadillo thanks to its low level of hairiness.

Young male of a seven-banded armadillo from Brazil and a Russian malachite, photos: Nadja Tata & Christel Clerc / MfN
Young male of a seven-banded armadillo from Brazil and a Russian malachite, photos: Nadja Tata & Christel Clerc / MfN

From this dataset, a Colombian Hercules beetle with a proud total length of almost 13 cm achieved some fame. It became the “face” of the Creating New Dimensions 3D hackathon in the fall of 2022, for which we were co-organizer, together with the NFDI consortia and AG3D, data provider, and venue for the finals and awards ceremony.

The beetle is also part of the VR experience in “Theatrum Radix”, a transdisciplinary exhibition project by Marlene Bart, which will open its doors in May 2023 at the Tieranatomisches Theater of the Humboldt University Berlin. The project already made it onto the shortlist of the DKB VR Art Prize.

Jan Panniger, taxidermist at the museum, handling the very fragile Hercules beetle; 3D prints and postcard for the hackathon “Creating New Dimensions” and beetle during photo shoot, photos: Nadja Tata / MfN
Jan Panniger, taxidermist at the museum, handling the very fragile Hercules beetle; 3D prints and postcard for the hackathon “Creating New Dimensions” and beetle during photo shoot, photos: Nadja Tata / MfN

Another highlight from the collaboration with relative.berlin is the trailer for the data portal, which showcases all the 3D models created and the associated metadata. Accompanied by music arranged especially for this trailer by Dominik Eulberg – DJ, artist, producer, biologist and visiting scientist at our museum – we travel from object to object in a virtual exhibition space, across the various sub-collections of the museum.



If you are also interested in using the 3D models from our collection, visit our data portal! They are all available for download in different quality levels with detailed descriptions of the object and some additional photos. We welcome your feedback and of course, we’d love to know where you are using them!